Burning with a low-contrast filter (00, 0, 1) will usually bring out detail in lighter areas such as clouds. It will not affect mid-range tones or dark tones as much.
A higher contrast filter like a 4 or 5 will affect the darker tones more. There's no quick simple way to learn, it just takes a lot of practice to get it down. I'd recommend a book from Tim Rudman or Bruce Barnbaum, if you want to see what's possible from an expert printer.
Here's a simple example of mine below. Overall print exposure was at grade #2, but the window was blank white without any outside detail. There was window detail in the negative, but it would have made the rest of image too dark if I extended the base exposure long enough to bring it out. I wanted to burn in the outside details without making the window frame or the shutter doors too dark. I cut a hole to match the window shape in cardboard ( about half the size of the image on the print) and held it a few inches above the easel while burning in the window with a #0 filter (after the base exposure has been made). Important to keep the cardboard moving slightly during exposure to blend in the difference.
I then did some more burning-in of the ceiling area, floor and lower corners with #3 and #4 filters to darken those areas a bit.
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