A print on matte paper may only have a DMax of 1.8 (or possibly less), which looks black to us when we're looking at the print.
The 4490 is a decent scanner, especially for reflective items. It can probably "see" a DMax in excess of 2.0, possibly as high as 2.2 or even higher. I haven't tested my scanner for reflective DMax, so I'm not sure where it tops out. So, to put it in a very simplified manner, the "blacks" in your print look "gray" to the scanner. Similarly, the whites in your print probably don't scan as complete white, either, because the paper doesn't reflect 100% of the light that hits it.
Fortunately, the fix is easy. SilverFast (as does PS Elements, and Epson Scan, too) has some sort of auto-adjust function. Not sure what it's called in different software packages, but Photoshop calls it "Auto Contrast" in the current version (CS5), and "Auto Levels" in older versions. PS Elements probably calls it one of the 2, depending on how old your version is. Basically it takes the image, finds the darkest point in the image, and shifts it to complete black. It does the same thing with the lightest parts of the image and stretches them out to complete white.
Obviously, an auto adjustment only goes so far. What you're doing is called setting the black point and the white point. Using the levels adjustment (available in both PSE and Silverfast), you can drag the black point and white point to wherever you want, and you can adjust the midpoint slider as well, to shift the midtones around a bit, if you like. In PSE, I think you can hold down the "Alt" key while you drag the sliders, and the image will change to show you what areas of the image are being "clipped" (set to pure white or black, depending on which slider you're pulling), which is another way to judge how aggressive an adjustment you're making.
Hope this helps...Good luck.
--Greg