If you go to a professional machine shop, they will have a big die cutter for each filter size (unless they use one of the fancy computerized dohickeys that cuts everything from one precise blade). If the metal is soft enough then that might be able to expand it out for you. Patience is the key.
If a dent or crossed thread is really bad but localized to one part, what you could do is just dremel out that section (which exerts almost no pressure on the lens if done properly) ...and then the filter threads will still be able to grab.
I have made slip-ons out of the [inexpensive, flexible, good] mamiya hoods that work quite well on lenses with messed up filter threads. All I do is circumcise the threaded section on the hood and the slip the hood onto the lens, and just pull the hood forward when shooting. Actually some of my lenses are set up this way even if their filter threads are good b/c it is so convenient.