Thanks Sandy, that is what I thought.
The only difference I can think of is that perhaps my mixing prior to using the first half was insufficient. I did not re-mix prior to using the second half, but of course just sitting allows more dispersion. Temperatures were exactly the same at all stages. There is no cooling down because I develop at the same temperature as the water bath, which happens to be within one or two degrees of the ambient temperature in the darkroom at all times.
The difference in the highlight on the blue channel is .19.
Although I have never had this problem before, I think I will start mixing the developer prior to loading the film in the tank to help insure consistency.