Sounds like you're not getting the film under the side rails and all the way in, if it's happening with different films and different holders. You should be able to feel the side rails as the film goes in, and the sheet should be seated flat at the flap end, so the flap closes all the way
You might try loading with powderless surgical gloves, so you can feel what's going on a little better without leaving fingerprints on the film. Also, practice with a scrap sheet or discarded negative so you can check with the lights on and be sure you're getting it right.
If you load the film with the holder oriented vertically and the end flap toward you, I usually like to put the notch in the lower left hand corner rather than the upper right, so if something happens to my usual labeling system that requires that I have to figure out in the dark what film I have in the holders, I can check the notches without pulling the sheet all the way out.