Mark -
My box is also designed around spiral bulbs. There are six bulbs, two rows of three, on 6" centers. I read somewhere (don't remember where) that this was the optimum spacing.
I also read somewhere that the spacing from the tip of the bulb to the top of the glass in the contact frame should be about the same as the center-to-center spacing between bulbs. That is supposed to be the optimum compromise between too close (shorter exposure time, but with a risk of hot-spots) and too far (even illumination, but longer exposure times).
Obviously, the total height of the box has to be the sum of:
the thickness of the contact frame
the design spacing
the height of the bulb from tip to the top of the base
the height of the base
In my case, that adds up to about 12", but may be different for you.
Don't know if the dimesions make sense scientifically, but the box appears to give even illumination, and the exposure time for Pt/Pd is a reasonable 10-15 minutes.