I do first develop, wash, bleach, clear, wash and then get to the hypo. When I reach the hypo stage all metallic silver has been removed. The latent image is visible as cream on clear. There is no metallic silver on the film. So, when I speak of 'clearing the highlights', I mean removing undeveloped silver halide such that during second development there is no silver in that region and the clear film base will shine through after second development is finished.
So...
I do my first development to completion using a 1st developer that contains no silver solvent. After bleaching, I want to do a hypo stage (as indicated above). At some point in the hypo, I will reach 'just right'...where I've removed enough halide so that the highlights are completely clear (no 2nd development will occur in that area) but I haven't removed any more halide than necessary.
If I leave the film in the hypo for too short a time, the highlights will retain some silver halide and, after 2nd development, be darker than the film base reducing Dmin. If I leave the film in the hypo for too long a time, not only will the image appear 'overexposed', but even the deepest shadows will have a very low Dmax (muddy, low contrast).
Returning to my original question, if I let my film sit in the hypo will it dissolve silver halide equally, or, more preferentially in areas with higher density than lower density? Does my agitation method matter?